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MGE databases:

NameSource
Bacteria PlasmidsNCBI
Archaea PlasmidsNCBI
Eukaryotae PlasmidsNCBI
PhagesNCBI
T4-like PhagesTulane
Microbial GenomesGenomeAtlas
Plasmid Genome DatabaseCentre of Ecology and Hydrology-Oxford
IS-FinderLaboratoire de Microbiologie et Génétique Moléculaires
Integrated Microbial Genomes (IMG)DOE Joint Genome Institute (JGI)

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