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Prophinder: Prophage view description
Help navigation Prophinder home Genome view description Prophage view description Prophage ACLAME hits Genomic region view File formats

Control panel

The control panel allows to modify the graphical representation of the ACLAME hits:

Prophage information Font size Redraw button Genome view link Prophage details link

Matrix view

All the ACLAME hits are shown as a matrix view (or heatmap). The prophage CDS are defined as columns and the ACLAME phages having hits as rows. Whenever a CDS has a hit in a given ACLAME phage, the cell will be coloured according to the BLASTP Evalue. A gradient from red to blue is used to represent the Evalues from 10E-200 to 0.01:

Prophage information Column headers Row headers Matrix cells

Help navigation Prophinder home Genome view description Prophage view description Prophage ACLAME hits Genomic region view File formats