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Categories
Categories Plasmids Viruses Prophages All Viruses and prophages
Version
ACLAME Families
Family ID
ID Function Nb
prots 		Scop
hits 		Nrdb
hits 		SWProt
hits
family:plasmids:1go:0004009  - ATP-binding cassette (ABC) transporter activity102117 100
family:plasmids:2phi:0000262  - toxin
go:0052049  - interaction with host via protein secreted by type III secretion system		6240 50
family:plasmids:3go:0000155  - two-component sensor activity
go:0000160  - two-component signal transduction system (phosphorelay)
go:0000156  - two-component response regulator activity		6160 0
family:plasmids:4go:0016887  - ATPase activity
go:0030541  - plasmid partitioning		5853 100
family:plasmids:5phi:0000134  - site-specific DNA excision
phi:0000144  - serine-based recombinase activity		4934 33
family:plasmids:6go:0016491  - oxidoreductase activity48370 100
family:plasmids:7phi:0000184  - transcription factor activity4351 100
family:plasmids:8go:0005215  - transporter activity
go:0046677  - response to antibiotic		3771 100
family:plasmids:9 go:0004009  - ATP-binding cassette (ABC) transporter activity3700 100
family:plasmids:10phi:0000143  - tyrosine-based recombinase activity
phi:0000131  - site-specific DNA recombination		3551 100
family:plasmids:11 go:0016491  - oxidoreductase activity351   
family:plasmids:12phi:0000153  - DDE-based recombinase activity
phi:0000136  - transpositional DNA recombination
function:501 - IS6 family		3090 6
family:plasmids:13 phi:0000184  - transcription factor activity2740 100
family:plasmids:14575 - plasmid partitioning protein family ParB/Spo0J
go:0003677  - DNA binding		2650 58
family:plasmids:15 phi:0000136  - transpositional DNA recombination
function:556 - IS5 family
phi:0000153  - DDE-based recombinase activity		2640 4
family:plasmids:16 go:0004009  - ATP-binding cassette (ABC) transporter activity2600 93
family:plasmids:17 phi:0000136  - transpositional DNA recombination
phi:0000153  - DDE-based recombinase activity
function:503 - Tn3 family		2500 11
family:plasmids:18phi:0000272  - type IV secretion system coupling protein
phi:0000271  - intercellular transfer by conjugation		2491 12
family:plasmids:19function:511 - IS110 family
phi:0000131  - site-specific DNA recombination		2440 15
family:plasmids:20function:498 - IS3 family
phi:0000136  - transpositional DNA recombination		2320 24
family:plasmids:21 go:0004009  - ATP-binding cassette (ABC) transporter activity2190 100
family:plasmids:22function:504 - IS21 family
phi:0000136  - transpositional DNA recombination
phi:0000153  - DDE-based recombinase activity		2190 15
family:plasmids:23 phi:0000153  - DDE-based recombinase activity
phi:0000136  - transpositional DNA recombination
function:509 - IS256 family		2110 13
family:plasmids:24phi:0000317  - relaxase activity
phi:0000271  - intercellular transfer by conjugation		2112 11
family:plasmids:25go:0016152  - mercury (II) reductase activity
go:0050787  - detoxification of mercury ion		20112 100
family:plasmids:26 go:0016491  - oxidoreductase activity19912 100
family:plasmids:27go:0004803  - transposase activity
phi:0000136  - transpositional DNA recombination
function:508 - IS66 family		1980 4
family:plasmids:28 phi:0000271  - intercellular transfer by conjugation
573 - Type IV secretion complex VirB11 family
phi:0000263  - type IV protein secretion/mating pair formation system complex
phi:0000338  - chaperon activity
go:0016887  - ATPase activity		1972 38
family:plasmids:29function:504 - IS21 family
phi:0000351  - positive regulation of DNA transposition		1970 13
family:plasmids:30 phi:0000184  - transcription factor activity1940 100
family:plasmids:31 phi:0000271  - intercellular transfer by conjugation
566 - Type IV secretion complex VirB4 family
phi:0000263  - type IV protein secretion/mating pair formation system complex		1880 19
family:plasmids:32go:0006270  - DNA replication initiation
phi:0000268  - plasmid vegetative DNA replication		1850 8
family:plasmids:33 phi:0000136  - transpositional DNA recombination
function:508 - IS66 family		1830 7
family:plasmids:34go:0016787  - hydrolase activity
go:0046677  - response to antibiotic		17920 100
family:plasmids:35go:0043789  - diguanylate cyclase activity
go:0006950  - response to stress
go:0042710  - biofilm formation		1761 75
family:plasmids:36go:0015075  - ion transmembrane transporter activity1630 100
family:plasmids:37 phi:0000136  - transpositional DNA recombination
phi:0000153  - DDE-based recombinase activity
function:510 - IS630 family		1620 1
family:plasmids:38go:0008237  - metallopeptidase activity1610 3
family:plasmids:39function:539 - IS1 family
go:0004803  - transposase activity
phi:0000136  - transpositional DNA recombination		1550 19
family:plasmids:40 go:0016491  - oxidoreductase activity14711 100
family:plasmids:41568 - Type IV secretion complex VirB6 family
phi:0000271  - intercellular transfer by conjugation		1400 17
family:plasmids:42go:0008933  - lytic transglycosylase activity1380 39
family:plasmids:43 go:0004009  - ATP-binding cassette (ABC) transporter activity1376 89
family:plasmids:44 phi:0000184  - transcription factor activity
go:0046685  - response to arsenic		1353 30
family:plasmids:45 phi:0000184  - transcription factor activity1325 100
family:plasmids:46 phi:0000184  - transcription factor activity
go:0050787  - detoxification of mercury ion		1291 54
family:plasmids:47go:0003697  - single-stranded DNA binding1275 100
family:plasmids:48 go:0016491  - oxidoreductase activity
go:0047829  - D-nopaline dehydrogenase activity		1261 100
family:plasmids:49 go:0004009  - ATP-binding cassette (ABC) transporter activity1220 72
family:plasmids:50 go:0004009  - ATP-binding cassette (ABC) transporter activity1224 61
family:plasmids:51 go:0005215  - transporter activity1181 100
family:plasmids:52 phi:0000184  - transcription factor activity1183 29
family:plasmids:53 go:0016491  - oxidoreductase activity11612 100
family:plasmids:54571 - Type IV secretion complex VirB9 family
phi:0000271  - intercellular transfer by conjugation
phi:0000283  - type IV secretion system secretin		1140 14
family:plasmids:55go:0004672  - protein kinase activity
go:0045449  - regulation of transcription
go:0000160  - two-component signal transduction system (phosphorelay)		1140 43
family:plasmids:56572 - Type IV secretion complex VirB10 family
phi:0000271  - intercellular transfer by conjugation
phi:0000284  - type IV secretion system bridging component		1130 15
family:plasmids:57 phi:0000271  - intercellular transfer by conjugation
go:0006270  - DNA replication initiation
go:0003896  - DNA primase activity		1130 3
family:plasmids:58 phi:0000143  - tyrosine-based recombinase activity
go:0006313  - transposition, DNA-mediated
function:506 - IS605 family		1090 12
family:plasmids:59function:512 - IS91 family
phi:0000160  - rolling circle transposition		1080 2
family:plasmids:60function:508 - IS66 family
phi:0000136  - transpositional DNA recombination		1070 2
family:plasmids:61 go:0004009  - ATP-binding cassette (ABC) transporter activity1070 56
family:plasmids:62go:0006314  - intron homing1020 11
family:plasmids:63phi:0000127  - transcriptional repressor activity
phi:0000360  - negative regulation of plasmid gene expression		1010 9
family:plasmids:64 go:0016491  - oxidoreductase activity10020 100
family:plasmids:65 go:0004009  - ATP-binding cassette (ABC) transporter activity986 100
family:plasmids:66go:0046527  - glucosyltransferase activity971 100
family:plasmids:67 phi:0000263  - type IV protein secretion/mating pair formation system complex
go:0008933  - lytic transglycosylase activity
563 - Type IV secretion complex VirB1 family
go:0003896  - DNA primase activity		950 7
family:plasmids:68go:0045020  - error-prone DNA repair
go:0003887  - DNA-directed DNA polymerase activity		955 100
family:plasmids:69go:0051213  - dioxygenase activity957 39
family:plasmids:70 go:0016491  - oxidoreductase activity940 100
family:plasmids:71 go:0004009  - ATP-binding cassette (ABC) transporter activity944 100
family:plasmids:72go:0003824  - catalytic activity9416 100
family:plasmids:73go:0006935  - chemotaxis930 43
family:plasmids:74 phi:0000153  - DDE-based recombinase activity
function:555 - IS3 family
phi:0000136  - transpositional DNA recombination		920 4
family:plasmids:75 phi:0000271  - intercellular transfer by conjugation
phi:0000280  - type IV secretion system-Mpf stabilizer		910 2
family:plasmids:76 go:0006270  - DNA replication initiation
phi:0000268  - plasmid vegetative DNA replication		890 8
family:plasmids:77phi:0000126  - DNA endonuclease activity885 21
family:plasmids:78go:0005102  - receptor binding884 100
family:plasmids:79 phi:0000271  - intercellular transfer by conjugation
go:0003916  - DNA topoisomerase activity		873 100
family:plasmids:80 phi:0000271  - intercellular transfer by conjugation
phi:0000263  - type IV protein secretion/mating pair formation system complex
go:0008932  - lytic endotransglycosylase activity		870 11
family:plasmids:81 phi:0000136  - transpositional DNA recombination
phi:0000153  - DDE-based recombinase activity
function:507 - Tn7 family		800 2
family:plasmids:82 go:0016491  - oxidoreductase activity
go:0004497  - monooxygenase activity		807 100
family:plasmids:83 phi:0000317  - relaxase activity790 14
family:plasmids:84go:0016853  - isomerase activity7913 95
family:plasmids:85 phi:0000153  - DDE-based recombinase activity
phi:0000136  - transpositional DNA recombination
function:505 - IS30 family		780 5
family:plasmids:86567 - Type IV secretion complex VirB5 family751 4
family:plasmids:87 go:0005215  - transporter activity750 94
family:plasmids:88 phi:0000184  - transcription factor activity740 63
family:plasmids:89function:499 - IS4 family
phi:0000136  - transpositional DNA recombination		730 13
family:plasmids:90 go:0016491  - oxidoreductase activity
go:0016788  - hydrolase activity, acting on ester bonds		734 68
family:plasmids:91go:0009307  - DNA restriction-modification system
phi:0000109  - DNA binding activity		732 9
family:plasmids:92go:0010038  - response to metal ion
go:0015562  - efflux transmembrane transporter activity		700 86
family:plasmids:93go:0055052  - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing683 57
family:plasmids:94go:0008483  - transaminase activity6817 100
family:plasmids:95 phi:0000136  - transpositional DNA recombination
function:540 - ISL3 family
phi:0000153  - DDE-based recombinase activity		670 3
family:plasmids:96570 - Type IV secretion complex VirB8 family660 13
family:plasmids:97 phi:0000184  - transcription factor activity650 100
family:plasmids:98go:0009008  - DNA-methyltransferase activity650 8
family:plasmids:99 go:0016491  - oxidoreductase activity654 100
family:plasmids:100phi:0000322  - post-segregational killing
phi:0000262  - toxin
function:550 - TA family vapBC/vag		641 5
family:plasmids:101 phi:0000143  - tyrosine-based recombinase activity
phi:0000131  - site-specific DNA recombination
phi:0000304  - plasmid dimer resolution		640 45
family:plasmids:102 go:0003677  - DNA binding640 6
family:plasmids:103 go:0015562  - efflux transmembrane transporter activity
go:0010038  - response to metal ion		642 35
family:plasmids:104 go:0016491  - oxidoreductase activity649 100
family:plasmids:105 go:0016491  - oxidoreductase activity643 100
family:plasmids:106 phi:0000184  - transcription factor activity
go:0030611  - arsenate reductase activity		632 46
family:plasmids:107go:0006260  - DNA replication610 2
family:plasmids:108 go:0005215  - transporter activity610 6
family:plasmids:109phi:0000333  - plasmid function unknown610 9
family:plasmids:110go:0010608  - posttranscriptional regulation of gene expression6013 44
family:plasmids:111go:0016829  - lyase activity607 100
family:plasmids:112 phi:0000136  - transpositional DNA recombination
phi:0000153  - DDE-based recombinase activity
function:500 - IS5 family		600 3
family:plasmids:113go:0004156  - dihydropteroate synthase activity
go:0042493  - response to drug		594 47
family:plasmids:114phi:0000114  - DNA helicase activity
phi:0000268  - plasmid vegetative DNA replication		591 56
family:plasmids:115 phi:0000272  - type IV secretion system coupling protein
phi:0000271  - intercellular transfer by conjugation		590 2
family:plasmids:116 phi:0000184  - transcription factor activity5911 100
family:plasmids:117phi:0000193  - restriction alleviation590 5
family:plasmids:118 go:0006270  - DNA replication initiation590 0
family:plasmids:119 go:0016491  - oxidoreductase activity
go:0051537  - 2 iron, 2 sulfur cluster binding		591 43
family:plasmids:120 phi:0000184  - transcription factor activity583 19
family:plasmids:121phi:0000264  - nucleoid associated protein580 17
family:plasmids:122 phi:0000184  - transcription factor activity580 100
family:plasmids:123 phi:0000153  - DDE-based recombinase activity
phi:0000136  - transpositional DNA recombination
function:557 - IS5 family		580 1
family:plasmids:124 go:0016491  - oxidoreductase activity570 100
family:plasmids:125 go:0004009  - ATP-binding cassette (ABC) transporter activity560 9
family:plasmids:126 go:0004497  - monooxygenase activity5419 100
family:plasmids:127 go:0046677  - response to antibiotic
go:0016772  - transferase activity, transferring phosphorus-containing groups		542 13
family:plasmids:128go:0007059  - chromosome segregation
go:0015616  - DNA translocase activity		540 100
family:plasmids:129 go:0051213  - dioxygenase activity535 22
family:plasmids:130 go:0016491  - oxidoreductase activity521 92
family:plasmids:131go:0016740  - transferase activity523 46
family:plasmids:132 phi:0000271  - intercellular transfer by conjugation
phi:0000277  - type IV secretion system motor		510 1
family:plasmids:133 go:0006270  - DNA replication initiation
phi:0000268  - plasmid vegetative DNA replication		510 8
family:plasmids:134 phi:0000317  - relaxase activity
phi:0000271  - intercellular transfer by conjugation		500 4
family:plasmids:135go:0003988  - acetyl-CoA C-acyltransferase activity507 100
family:plasmids:136 phi:0000262  - toxin
phi:0000322  - post-segregational killing
function:547 - TA family parDE		500 1
family:plasmids:137go:0016836  - hydro-lyase activity501 19
family:plasmids:138 phi:0000333  - plasmid function unknown500 9
family:plasmids:139 phi:0000333  - plasmid function unknown500 100
family:plasmids:140 go:0005215  - transporter activity490 100
family:plasmids:141 phi:0000263  - type IV protein secretion/mating pair formation system complex
phi:0000271  - intercellular transfer by conjugation		490 0
family:plasmids:142 phi:0000271  - intercellular transfer by conjugation
go:0009297  - pilus biogenesis		490 1
family:plasmids:143function:513 - IS481 family
phi:0000136  - transpositional DNA recombination		490 10
family:plasmids:144 go:0004009  - ATP-binding cassette (ABC) transporter activity490 7
family:plasmids:145 go:0005215  - transporter activity
phi:0000227  - type I secretion membrane fusion protein activity		490 48
family:plasmids:146go:0009289  - fimbrium
phi:0000271  - intercellular transfer by conjugation		480 3
family:plasmids:147 phi:0000263  - type IV protein secretion/mating pair formation system complex
phi:0000271  - intercellular transfer by conjugation		480 1
family:plasmids:148 phi:0000184  - transcription factor activity482 100
family:plasmids:149 go:0016853  - isomerase activity483 50
family:plasmids:150 go:0006950  - response to stress483 55
family:plasmids:151 go:0016772  - transferase activity, transferring phosphorus-containing groups479 100
family:plasmids:152go:0045203  - integral to cell outer membrane
go:0015288  - porin activity		470 63
family:plasmids:153go:0003909  - DNA ligase activity470 68
family:plasmids:154go:0009405  - pathogenesis470 0
family:plasmids:155 go:0005215  - transporter activity471 56
family:plasmids:156function:544 - TA family epsilon-zeta
phi:0000262  - toxin
phi:0000322  - post-segregational killing		461 8
family:plasmids:157 phi:0000333  - plasmid function unknown
go:0009405  - pathogenesis		460 9
family:plasmids:158 phi:0000263  - type IV protein secretion/mating pair formation system complex460 1
family:plasmids:159 go:0004009  - ATP-binding cassette (ABC) transporter activity460 21
family:plasmids:160 go:0016491  - oxidoreductase activity469 44
family:plasmids:161 go:0016491  - oxidoreductase activity460 100
family:plasmids:162 go:0009008  - DNA-methyltransferase activity450 0
family:plasmids:163 phi:0000136  - transpositional DNA recombination
phi:0000153  - DDE-based recombinase activity
function:500 - IS5 family		450 3
family:plasmids:164 phi:0000264  - nucleoid associated protein457 100
family:plasmids:165 phi:0000271  - intercellular transfer by conjugation
phi:0000284  - type IV secretion system bridging component		450 1
family:plasmids:166 go:0009297  - pilus biogenesis
go:0016407  - acetyltransferase activity		450 4
family:plasmids:167go:0008168  - methyltransferase activity
go:0046677  - response to antibiotic		454 100
family:plasmids:168go:0009266  - response to temperature stimulus453 100
family:plasmids:169 go:0005215  - transporter activity
go:0042493  - response to drug		451 100
family:plasmids:170 phi:0000143  - tyrosine-based recombinase activity
phi:0000131  - site-specific DNA recombination		450 63
family:plasmids:171 go:0006270  - DNA replication initiation440 0
family:plasmids:172 go:0016787  - hydrolase activity440 12
family:plasmids:173phi:0000278  - type IV secretion system minor pilus component
phi:0000271  - intercellular transfer by conjugation		440 2
family:plasmids:174 go:0016491  - oxidoreductase activity440 22
family:plasmids:175 go:0016740  - transferase activity446 100
family:plasmids:176 phi:0000136  - transpositional DNA recombination440 7
family:plasmids:177go:0045154  - electron transporter, transferring electrons within cytochrome c oxidase complex activity444 100
family:plasmids:178 phi:0000143  - tyrosine-based recombinase activity
go:0006313  - transposition, DNA-mediated
function:506 - IS605 family		443 2
family:plasmids:179 go:0016491  - oxidoreductase activity444 71
family:plasmids:180 phi:0000333  - plasmid function unknown440 1
family:plasmids:181 go:0016787  - hydrolase activity444 39
family:plasmids:182 phi:0000271  - intercellular transfer by conjugation
phi:0000273  - pilin		430 3
family:plasmids:183 go:0009008  - DNA-methyltransferase activity432 75
family:plasmids:184 phi:0000333  - plasmid function unknown433 13
family:plasmids:185Not assigned430 100
family:plasmids:186 go:0016491  - oxidoreductase activity438 40
family:plasmids:187 phi:0000317  - relaxase activity420 2
family:plasmids:188 phi:0000333  - plasmid function unknown420 1
family:plasmids:189go:0008800  - beta-lactamase activity
go:0046677  - response to antibiotic		4214 79
family:plasmids:190 phi:0000127  - transcriptional repressor activity
phi:0000360  - negative regulation of plasmid gene expression		420 2
family:plasmids:191 phi:0000317  - relaxase activity410 3
family:plasmids:192 phi:0000333  - plasmid function unknown410 1
family:plasmids:193 go:0004009  - ATP-binding cassette (ABC) transporter activity412 26
family:plasmids:194go:0016987  - sigma factor activity410 40
family:plasmids:195 go:0016491  - oxidoreductase activity419 100
family:plasmids:196 go:0016740  - transferase activity411 100
family:plasmids:197 go:0046677  - response to antibiotic
go:0009012  - aminoglycoside 3''-adenylyltransferase activity		400 11
family:plasmids:198go:0006276  - plasmid maintenance400 0
family:plasmids:199phi:0000313  - type IV secretion system pilin maturation
phi:0000271  - intercellular transfer by conjugation		390 6
family:plasmids:200 phi:0000184  - transcription factor activity391 31
family:plasmids:201function:545 - TA family higBA
phi:0000262  - toxin
phi:0000322  - post-segregational killing		390 4
family:plasmids:202 phi:0000263  - type IV protein secretion/mating pair formation system complex
565 - Type IV secretion complex VirB3 family		390 12
family:plasmids:203go:0003754  - chaperone activity390 44
family:plasmids:204 phi:0000263  - type IV protein secretion/mating pair formation system complex390 1
family:plasmids:205 phi:0000184  - transcription factor activity395 100
family:plasmids:206 phi:0000184  - transcription factor activity390 14
family:plasmids:207 phi:0000114  - DNA helicase activity390 39
family:plasmids:208 go:0006270  - DNA replication initiation
phi:0000268  - plasmid vegetative DNA replication		390 9
family:plasmids:209 go:0005215  - transporter activity390 100
family:plasmids:210 go:0005215  - transporter activity393 47
family:plasmids:211 go:0003754  - chaperone activity396 100
family:plasmids:212function:547 - TA family parDE
phi:0000322  - post-segregational killing
go:0015643  - toxin binding		380 3
family:plasmids:213phi:0000324  - plasmid mobilization380 2
family:plasmids:214 phi:0000263  - type IV protein secretion/mating pair formation system complex
phi:0000271  - intercellular transfer by conjugation		380 2
family:plasmids:215go:0004527  - exonuclease activity380 100
family:plasmids:216 go:0016491  - oxidoreductase activity
phi:0000271  - intercellular transfer by conjugation		380 11
family:plasmids:217 go:0016787  - hydrolase activity382 100
family:plasmids:218 phi:0000333  - plasmid function unknown380 6
family:plasmids:219 phi:0000153  - DDE-based recombinase activity
function:541 - IS1380 family
phi:0000136  - transpositional DNA recombination		380 0
family:plasmids:220 phi:0000333  - plasmid function unknown380 0
family:plasmids:221 go:0016491  - oxidoreductase activity382 88
family:plasmids:222go:0008757  - S-adenosylmethionine-dependent methyltransferase activity385 100
family:plasmids:223 phi:0000184  - transcription factor activity371 11
family:plasmids:224 go:0006270  - DNA replication initiation
phi:0000268  - plasmid vegetative DNA replication		370 1
family:plasmids:225 phi:0000333  - plasmid function unknown370 13
family:plasmids:226 phi:0000143  - tyrosine-based recombinase activity
phi:0000131  - site-specific DNA recombination		370 100
family:plasmids:227 phi:0000333  - plasmid function unknown370 4
family:plasmids:228 phi:0000333  - plasmid function unknown370 0
family:plasmids:229go:0004040  - amidase activity370 100
family:plasmids:230 go:0016787  - hydrolase activity365 100
family:plasmids:231 go:0016740  - transferase activity362 100
family:plasmids:232 phi:0000136  - transpositional DNA recombination
go:0016887  - ATPase activity		360 0
family:plasmids:233 phi:0000333  - plasmid function unknown360 1
family:plasmids:234 phi:0000184  - transcription factor activity360 0
family:plasmids:235phi:0000096  - phage tail fiber major protein360 3
family:plasmids:236go:0003678  - DNA helicase activity360 100
family:plasmids:237 go:0006270  - DNA replication initiation360 1
family:plasmids:238 go:0016829  - lyase activity3614 100
family:plasmids:239 phi:0000184  - transcription factor activity350 58
family:plasmids:240phi:0000275  - type IV secretion system pilin
phi:0000271  - intercellular transfer by conjugation
phi:0000263  - type IV protein secretion/mating pair formation system complex
564 - Type IV secretion complex VirB2 family		350 5
family:plasmids:241 go:0016740  - transferase activity354 52
family:plasmids:242go:0016744  - transferase activity, transferring aldehyde or ketonic groups350 100
family:plasmids:243 phi:0000271  - intercellular transfer by conjugation
phi:0000276  - VirB3 related outer membrane protein		340 2
family:plasmids:244phi:0000196  - plasmid copy number control340 5
family:plasmids:245go:0018577  - catechol 2,3-dioxygenase activity342 21
family:plasmids:246 go:0009008  - DNA-methyltransferase activity340 26
family:plasmids:247 go:0016829  - lyase activity340 37
family:plasmids:248go:0043683  - type IV pilus biogenesis340 11
family:plasmids:249go:0046138  - coenzyme and prosthetic group biosynthetic process330 1
family:plasmids:250go:0004604  - phosphoadenylyl-sulfate reductase (thioredoxin) activity330 0
family:plasmids:251 go:0000156  - two-component response regulator activity
go:0000160  - two-component signal transduction system (phosphorelay)		331 23
family:plasmids:252 phi:0000131  - site-specific DNA recombination
phi:0000144  - serine-based recombinase activity		330 2
family:plasmids:253 go:0051213  - dioxygenase activity336 19
family:plasmids:254 phi:0000153  - DDE-based recombinase activity
phi:0000136  - transpositional DNA recombination		330 2
family:plasmids:255 phi:0000127  - transcriptional repressor activity
phi:0000360  - negative regulation of plasmid gene expression		330 100
family:plasmids:256 go:0016491  - oxidoreductase activity332 36
family:plasmids:257 go:0016740  - transferase activity334 25
family:plasmids:258phi:0000290  - type III secretion system secretin320 34
family:plasmids:259 go:0005215  - transporter activity
go:0050787  - detoxification of mercury ion		320 9
family:plasmids:260 phi:0000333  - plasmid function unknown320 37
family:plasmids:261 phi:0000333  - plasmid function unknown320 2
family:plasmids:262 go:0016787  - hydrolase activity321 0
family:plasmids:263 phi:0000333  - plasmid function unknown320 0
family:plasmids:264go:0016163  - nitrogenase activity326 100
family:plasmids:265phi:0000318  - plasmid fertility inhibition321 5
family:plasmids:266 phi:0000333  - plasmid function unknown310 0
family:plasmids:267 phi:0000271  - intercellular transfer by conjugation310 2
family:plasmids:268go:0004016  - adenylate cyclase activity310 1
family:plasmids:269 go:0045154  - electron transporter, transferring electrons within cytochrome c oxidase complex activity310 100
family:plasmids:270 go:0016491  - oxidoreductase activity310 35
family:plasmids:271 go:0004497  - monooxygenase activity312 26
family:plasmids:272 phi:0000184  - transcription factor activity312 34
family:plasmids:273 phi:0000333  - plasmid function unknown310 0
family:plasmids:274go:0006124  - ferredoxin metabolic process300 100
family:plasmids:275 go:0016853  - isomerase activity301 100
family:plasmids:276go:0051046  - regulation of secretion
phi:0000267  - type III protein secretion system complex		301 5
family:plasmids:277 phi:0000109  - DNA binding activity
phi:0000271  - intercellular transfer by conjugation
phi:0000156  - relaxosome		300 2
family:plasmids:278 phi:0000114  - DNA helicase activity300 5
family:plasmids:279 phi:0000184  - transcription factor activity300 27
family:plasmids:280 phi:0000333  - plasmid function unknown300 2
family:plasmids:281 phi:0000193  - restriction alleviation300 2
family:plasmids:282 phi:0000333  - plasmid function unknown300 0
family:plasmids:283 go:0045449  - regulation of transcription
go:0003700  - transcription factor activity		300 1
family:plasmids:284 phi:0000333  - plasmid function unknown304 15
family:plasmids:285go:0016879  - ligase activity, forming carbon-nitrogen bonds303 62
family:plasmids:286 phi:0000184  - transcription factor activity300 13
family:plasmids:287 go:0016740  - transferase activity306 100
family:plasmids:288 go:0016772  - transferase activity, transferring phosphorus-containing groups300 100
family:plasmids:289 go:0015616  - DNA translocase activity
576 - plasmid partitioning protein family ParM		290 3
family:plasmids:290 go:0051046  - regulation of secretion
go:0009405  - pathogenesis		292 6
family:plasmids:291 go:0005215  - transporter activity290 60
family:plasmids:292go:0016671  - oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor295 54
family:plasmids:293function:546 - TA family mazEF
phi:0000322  - post-segregational killing
phi:0000262  - toxin		293 21
family:plasmids:294go:0003723  - RNA binding
phi:0000196  - plasmid copy number control		296 1
family:plasmids:295 phi:0000333  - plasmid function unknown290 0
family:plasmids:296function:499 - IS4 family290 1
family:plasmids:297 go:0006270  - DNA replication initiation
go:0003896  - DNA primase activity		290 2
family:plasmids:298 go:0009307  - DNA restriction-modification system
go:0009008  - DNA-methyltransferase activity		291 13
family:plasmids:299 go:0016491  - oxidoreductase activity280 12
family:plasmids:300 go:0003887  - DNA-directed DNA polymerase activity280 100
family:plasmids:301function:499 - IS4 family280 0
family:plasmids:302 phi:0000317  - relaxase activity280 5
family:plasmids:303 phi:0000184  - transcription factor activity270 33
family:plasmids:304 go:0016787  - hydrolase activity277 100
family:plasmids:305 phi:0000267  - type III protein secretion system complex
go:0016887  - ATPase activity		276 100
family:plasmids:306phi:0000315  - plasmid entry exclusion270 6
family:plasmids:307 go:0050787  - detoxification of mercury ion270 1
family:plasmids:308 phi:0000271  - intercellular transfer by conjugation
phi:0000109  - DNA binding activity
phi:0000156  - relaxosome		270 2
family:plasmids:309 phi:0000333  - plasmid function unknown270 1
family:plasmids:310 phi:0000333  - plasmid function unknown270 20
family:plasmids:311 go:0016829  - lyase activity279 100
family:plasmids:312go:0046690  - response to tellurium ion270 15
family:plasmids:313phi:0000192  - thioredoxin2711 100
family:plasmids:314 go:0043683  - type IV pilus biogenesis270 17
family:plasmids:315 phi:0000333  - plasmid function unknown270 12
family:plasmids:316576 - plasmid partitioning protein family ParM
go:0000146  - microfilament motor activity		272 1
family:plasmids:317 phi:0000263  - type IV protein secretion/mating pair formation system complex
phi:0000271  - intercellular transfer by conjugation		270 2
family:plasmids:318go:0051302  - regulation of cell division
go:0016887  - ATPase activity		270 15
family:plasmids:319 phi:0000262  - toxin
phi:0000322  - post-segregational killing
function:549 - TA family relBE		260 3
family:plasmids:320 phi:0000156  - relaxosome260 3
family:plasmids:321 go:0016772  - transferase activity, transferring phosphorus-containing groups261 100
family:plasmids:322 go:0005215  - transporter activity260 82
family:plasmids:323phi:0000358  - relaxosome assembly260 3
family:plasmids:324 go:0016787  - hydrolase activity263 100
family:plasmids:325 go:0016407  - acetyltransferase activity260 21
family:plasmids:326function:546 - TA family mazEF
phi:0000322  - post-segregational killing
go:0015643  - toxin binding		261 4
family:plasmids:327go:0005507  - copper ion binding263 6
family:plasmids:328go:0016021  - integral to membrane260 5
family:plasmids:329 phi:0000184  - transcription factor activity260 37
family:plasmids:330 phi:0000114  - DNA helicase activity
go:0006281  - DNA repair		260 35
family:plasmids:331function:500 - IS5 family260 2
family:plasmids:332go:0004459  - L-lactate dehydrogenase activity263 32
family:plasmids:333 go:0043683  - type IV pilus biogenesis260 19
family:plasmids:334 go:0046527  - glucosyltransferase activity260 86
family:plasmids:335 phi:0000262  - toxin
phi:0000322  - post-segregational killing
function:562 - TA family HOK/SOK		260 20
family:plasmids:336 go:0016787  - hydrolase activity254 89
family:plasmids:337go:0008978  - prepilin peptidase activity
phi:0000271  - intercellular transfer by conjugation
phi:0000313  - type IV secretion system pilin maturation		250 3
family:plasmids:338function:547 - TA family parDE
phi:0000322  - post-segregational killing
phi:0000262  - toxin		250 0
family:plasmids:339 phi:0000271  - intercellular transfer by conjugation250 1
family:plasmids:340 phi:0000184  - transcription factor activity250 2
family:plasmids:341 go:0016740  - transferase activity250 1
family:plasmids:342 phi:0000184  - transcription factor activity250 7
family:plasmids:343 phi:0000333  - plasmid function unknown250 1
family:plasmids:344 go:0016740  - transferase activity251 2
family:plasmids:345go:0008774  - acetaldehyde dehydrogenase (acetylating) activity252 11
family:plasmids:346 go:0016491  - oxidoreductase activity254 8
family:plasmids:347 go:0016787  - hydrolase activity254 74
family:plasmids:348 go:0046138  - coenzyme and prosthetic group biosynthetic process250 15
family:plasmids:349 phi:0000264  - nucleoid associated protein251 20
family:plasmids:350 phi:0000333  - plasmid function unknown250 3
family:plasmids:351 go:0005215  - transporter activity250 5
family:plasmids:352 phi:0000333  - plasmid function unknown250 1
family:plasmids:353 go:0016829  - lyase activity2516 100
family:plasmids:354 phi:0000333  - plasmid function unknown250 0
family:plasmids:355 phi:0000333  - plasmid function unknown240 1
family:plasmids:356function:547 - TA family parDE
go:0015643  - toxin binding
phi:0000322  - post-segregational killing		240 9
family:plasmids:357 go:0009297  - pilus biogenesis
phi:0000263  - type IV protein secretion/mating pair formation system complex
phi:0000271  - intercellular transfer by conjugation		240 1
family:plasmids:358 go:0016740  - transferase activity240 2
family:plasmids:359 go:0005215  - transporter activity244 31
family:plasmids:360 phi:0000333  - plasmid function unknown240 0
family:plasmids:361 go:0016829  - lyase activity243 100
family:plasmids:362 go:0046527  - glucosyltransferase activity240 74
family:plasmids:363 go:0046677  - response to antibiotic
go:0016407  - acetyltransferase activity		242 24
family:plasmids:364 go:0005215  - transporter activity240 29
family:plasmids:365go:0000337  - regulation of transposition, DNA-mediated242 1
family:plasmids:366 phi:0000322  - post-segregational killing
function:550 - TA family vapBC/vag
go:0015643  - toxin binding		240 6
family:plasmids:367 phi:0000263  - type IV protein secretion/mating pair formation system complex240 1
family:plasmids:368go:0008473  - ornithine cyclodeaminase activity232 16
family:plasmids:369 phi:0000263  - type IV protein secretion/mating pair formation system complex
phi:0000271  - intercellular transfer by conjugation		230 0
family:plasmids:370 phi:0000333  - plasmid function unknown230 0
family:plasmids:371phi:0000357  - type III secretion complex injectisome230 29
family:plasmids:372phi:0000295  - type III secretion inner membrane ring230 18
family:plasmids:373 phi:0000295  - type III secretion inner membrane ring230 30
family:plasmids:374 phi:0000357  - type III secretion complex injectisome230 30
family:plasmids:375 phi:0000271  - intercellular transfer by conjugation230 2
family:plasmids:376 phi:0000156  - relaxosome
phi:0000271  - intercellular transfer by conjugation		230 2
family:plasmids:377 go:0006270  - DNA replication initiation230 7
family:plasmids:378 go:0016491  - oxidoreductase activity230 74
family:plasmids:379 phi:0000184  - transcription factor activity230 0
family:plasmids:380 phi:0000322  - post-segregational killing
go:0015643  - toxin binding
function:548 - TA family phD-doc		233 13
family:plasmids:381 phi:0000333  - plasmid function unknown230 7
family:plasmids:382go:0015703  - chromate transport230 6
family:plasmids:383 phi:0000268  - plasmid vegetative DNA replication
go:0006270  - DNA replication initiation		230 1
family:plasmids:384 go:0016740  - transferase activity230 7
family:plasmids:385 phi:0000333  - plasmid function unknown230 0
family:plasmids:386Not assigned230 2
family:plasmids:387 go:0046677  - response to antibiotic
go:0008800  - beta-lactamase activity		235 23
family:plasmids:388 go:0016407  - acetyltransferase activity230 13
family:plasmids:389phi:0000319  - autoinducer synthesis221 25
family:plasmids:390 phi:0000333  - plasmid function unknown220 0
family:plasmids:391go:0008745  - N-acetylmuramoyl-L-alanine amidase activity220 3
family:plasmids:392 phi:0000295  - type III secretion inner membrane ring220 16
family:plasmids:393 go:0052049  - interaction with host via protein secreted by type III secretion system
go:0009405  - pathogenesis
go:0003754  - chaperone activity		220 8
family:plasmids:394 phi:0000333  - plasmid function unknown220 0
family:plasmids:395Not assigned220 5
family:plasmids:396phi:0000336  - plasmid mediated modulation of host functions220 3
family:plasmids:397 phi:0000271  - intercellular transfer by conjugation220 2
family:plasmids:398 phi:0000271  - intercellular transfer by conjugation
phi:0000281  - type IV secretion system pilus associated lipoprotein		220 0
family:plasmids:399 phi:0000315  - plasmid entry exclusion220 0
family:plasmids:400 go:0016021  - integral to membrane220 25
family:plasmids:401 go:0000155  - two-component sensor activity222 10
family:plasmids:402go:0009306  - protein secretion
go:0016887  - ATPase activity		220 1
family:plasmids:403function:498 - IS3 family
phi:0000136  - transpositional DNA recombination		220 4
family:plasmids:404 go:0006270  - DNA replication initiation220 0
family:plasmids:405 go:0008168  - methyltransferase activity
go:0046677  - response to antibiotic		223 100
family:plasmids:406 phi:0000184  - transcription factor activity220 98
family:plasmids:407go:0004519  - endonuclease activity221 16
family:plasmids:408 phi:0000333  - plasmid function unknown220 0
family:plasmids:409go:0019213  - deacetylase activity222 20
family:plasmids:410 go:0009289  - fimbrium220 6
family:plasmids:411 phi:0000333  - plasmid function unknown220 2
family:plasmids:412 go:0006270  - DNA replication initiation220 2
family:plasmids:413function:499 - IS4 family220 0
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Generated on 9 July 2017Copyright (C) 2003-2017 The ACLAME team.
Terms of use		The ACLAME team